Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis

Salvador Blanco Negrete; Ravi Prakash Joshi; Rollyn Labuguen; Jumpei Matsumoto; Tomohiro Shibata

doi:10.1109/ICIEV.2018.8641000

Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis

Salvador Blanco Negrete, Ravi Prakash Joshi, Rollyn Labuguen, Jumpei Matsumoto, Tomohiro Shibata

System Emotional Science

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Abstract

In this paper, we propose a visualization framework for mouse anatomical cardinal planes and axes by extending an open-source platform called »3DTracker-FAB» and demonstrate its capability towards augmentation. Previously, the 3DTracker-FAB was only able to determine the mouse anatomical model, showing its head, neck, trunk, hip, and nose. We enhance the software to include body axes and planes of the subject in relation to its anatomical model. This work will help scientist working with animals since anatomical axis and planes are used for describing motion, and anatomical location.

Original language	English
Title of host publication	2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	195-199
Number of pages	5
ISBN (Electronic)	9781538651612
DOIs	https://doi.org/10.1109/ICIEV.2018.8641000
State	Published - 2018/07/02
Event	Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018 - Kitakyushu, Japan Duration: 2018/06/25 → 2018/06/28

Publication series

Name	2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018

Conference

Conference	Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018
Country/Territory	Japan
City	Kitakyushu
Period	2018/06/25 → 2018/06/28

Keywords

Anatomical axis
Cardinal planes
Mouse behavior analysis

ASJC Scopus subject areas

Signal Processing
Control and Optimization
Artificial Intelligence
Computer Vision and Pattern Recognition
Information Systems

Access to Document

10.1109/ICIEV.2018.8641000

Cite this

Negrete, S. B., Prakash Joshi, R., Labuguen, R., Matsumoto, J., & Shibata, T. (2018). Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis. In 2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018 (pp. 195-199). Article 8641000 (2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICIEV.2018.8641000

Negrete, Salvador Blanco ; Prakash Joshi, Ravi ; Labuguen, Rollyn et al. / Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis. 2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018. Institute of Electrical and Electronics Engineers Inc., 2018. pp. 195-199 (2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018).

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abstract = "In this paper, we propose a visualization framework for mouse anatomical cardinal planes and axes by extending an open-source platform called »3DTracker-FAB» and demonstrate its capability towards augmentation. Previously, the 3DTracker-FAB was only able to determine the mouse anatomical model, showing its head, neck, trunk, hip, and nose. We enhance the software to include body axes and planes of the subject in relation to its anatomical model. This work will help scientist working with animals since anatomical axis and planes are used for describing motion, and anatomical location.",

keywords = "Anatomical axis, Cardinal planes, Mouse behavior analysis",

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Negrete, SB, Prakash Joshi, R, Labuguen, R, Matsumoto, J & Shibata, T 2018, Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis. in 2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018., 8641000, 2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018, Institute of Electrical and Electronics Engineers Inc., pp. 195-199, Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018, Kitakyushu, Japan, 2018/06/25. https://doi.org/10.1109/ICIEV.2018.8641000

Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis. / Negrete, Salvador Blanco; Prakash Joshi, Ravi; Labuguen, Rollyn et al.
2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018. Institute of Electrical and Electronics Engineers Inc., 2018. p. 195-199 8641000 (2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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AU - Prakash Joshi, Ravi

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AU - Shibata, Tomohiro

PY - 2018/7/2

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N2 - In this paper, we propose a visualization framework for mouse anatomical cardinal planes and axes by extending an open-source platform called »3DTracker-FAB» and demonstrate its capability towards augmentation. Previously, the 3DTracker-FAB was only able to determine the mouse anatomical model, showing its head, neck, trunk, hip, and nose. We enhance the software to include body axes and planes of the subject in relation to its anatomical model. This work will help scientist working with animals since anatomical axis and planes are used for describing motion, and anatomical location.

AB - In this paper, we propose a visualization framework for mouse anatomical cardinal planes and axes by extending an open-source platform called »3DTracker-FAB» and demonstrate its capability towards augmentation. Previously, the 3DTracker-FAB was only able to determine the mouse anatomical model, showing its head, neck, trunk, hip, and nose. We enhance the software to include body axes and planes of the subject in relation to its anatomical model. This work will help scientist working with animals since anatomical axis and planes are used for describing motion, and anatomical location.

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Negrete SB, Prakash Joshi R, Labuguen R, Matsumoto J, Shibata T. Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis. In 2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018. Institute of Electrical and Electronics Engineers Inc. 2018. p. 195-199. 8641000. (2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018). doi: 10.1109/ICIEV.2018.8641000

Mouse anatomical cardinal planes and axes towards augmentation for behavior analysis

Abstract

Publication series

Conference

Keywords

ASJC Scopus subject areas

Access to Document

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Cite this